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The Virtual Cell versions
VCell 4.5 (click to run-current public beta 4-1-08)
- Hybrid Stochastic simulations (HySSS)
- Differential Algebraic Solver for non-spatial "fast" systems
- Virtual Microscopy integration
- math generation improvements (improved comparison)
- additional SBML improvements (e.g. libSBML 3.0.2)
- formalize VCML as XML document
VCell 4.4 (click to run - latest release 4-1-08)
Previous Versions
VCell 4.3.1 (9/19/2007)
- BioNetGen@VCell
- Copy/Paste parameters (initial conditions, math overrides, simulation results and parameter estimation values) amongst each other
- Publish documents
- Improvements in memory efficiency and resource utilization
- Improvements in SBML import/export
VCell 4.2 (9/1/2006)
- Parameter scans
- Faster surface visualization
- Automated GUI testing framework
- 2D/3D Membrane Diffusion added to BioModels and MathModels.
- 3D Surface Visualization for spatial simulation results.
- Reaction diagram draws faster for large networks, and easier to resize
- Known molecular weights added to controlled vocabulary, and improved queries Species (from models or controlled vocabulary)
- Model Editor layout improved.
- additional simulation status is provided while running jobs
- Stiff solver support for uniform output time step (useful for SBML support)
- Added 2D/3D membrane diffusion and sensitivity analysis to numerical methods testing framework.
VCell 4.1 (4/3/2006)
- 2D/3D Membrane Diffusion added to BioModels and MathModels.
- 3D Surface Visualization for spatial simulation results.
- Reaction diagram draws faster for large networks, and easier to resize
- Known molecular weights added to controlled vocabulary, and improved queries Species (from models or controlled vocabulary)
- Model Editor layout improved.
- Additional simulation status is provided while running jobs
- Stiff solver support for uniform output time step (useful for SBML support)
- Added 2D/3D membrane diffusion and sensitivity analysis to numerical methods testing framework.
VCell 4.0 (10/03/2005)
- Completely redesigned user interface.
- Multiple document interface (MDI).
- Multiple application viewing inside each BioModel.
- Database Manager for managing documents.
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